Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 FAM58CP-201ENST00000435741 640 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 AC005829.1-201ENST00000570002 483 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 GPALPP1-207ENST00000611650 899 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 C20orf181-201ENST00000623918 480 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 AC079781.4-201ENST00000641908 219 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 AC011477.6-201ENST00000604980 1927 ntBASIC14.37□□□□□ -0.11
SNX33Q8WV41 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SNX33Q8WV41 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX33Q8WV41 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 AC006486.2-201ENST00000624246 2199 ntBASIC14.36□□□□□ -0.11
SNX33Q8WV41 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 AC067750.1-201ENST00000608826 6545 ntBASIC14.36□□□□□ -0.11
SNX33Q8WV41 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 MKNK2P1-201ENST00000437526 628 ntBASIC14.36□□□□□ -0.11
SNX33Q8WV41 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 AC093724.1-201ENST00000448659 1027 ntBASIC14.36□□□□□ -0.11
SNX33Q8WV41 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 AL078644.1-201ENST00000609881 752 ntBASIC14.36□□□□□ -0.11
SNX33Q8WV41 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX33Q8WV41 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SNX33Q8WV41 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNX33Q8WV41 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX33Q8WV41 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX33Q8WV41 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SNX33Q8WV41 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX33Q8WV41 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms