Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 AL008707.1-201ENST00000422498 534 ntBASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 AC011477.6-201ENST00000604980 1927 ntBASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRT28Q7Z3Y7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AC106886.4-201ENST00000623557 2502 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AL139094.1-201ENST00000405549 1188 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AP003171.2-201ENST00000528208 925 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AP001002.3-201ENST00000623482 206 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 AC008132.1-202ENST00000342005 1389 ntBASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT28Q7Z3Y7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 EEF1DP6-201ENST00000449232 372 ntBASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 AC100850.1-201ENST00000506768 649 ntBASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 PRKXP1-201ENST00000561423 1122 ntBASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 OR10B1P-201ENST00000601666 907 ntBASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 AC091544.8-201ENST00000619490 361 ntBASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT28Q7Z3Y7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms