Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 FOXO1B-201ENST00000504678 1527 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 AP001282.1-201ENST00000531301 1499 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 MIR346-201ENST00000362234 95 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 AL627223.1-201ENST00000416693 442 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 DNAJB3-202ENST00000449667 1266 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 RNA5SP410-201ENST00000516285 106 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.47□□□□□ -0.09
NIPAL3Q6P499 AC090616.6-203ENST00000579186 1945 ntBASIC14.47□□□□□ -0.09
NIPAL3Q6P499 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
NIPAL3Q6P499 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.46□□□□□ -0.09
NIPAL3Q6P499 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NIPAL3Q6P499 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms