Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 LINC02447-202ENST00000501888 2146 ntBASIC18.4■□□□□ 0.54
CERKLQ49MI3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 KLF2P4-201ENST00000451959 1225 ntBASIC18.4■□□□□ 0.54
CERKLQ49MI3 CTBP2P5-201ENST00000454986 1264 ntBASIC18.4■□□□□ 0.54
CERKLQ49MI3 AC093433.1-201ENST00000458048 571 ntBASIC18.4■□□□□ 0.54
CERKLQ49MI3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 MSTO2P-201ENST00000314835 1709 ntBASIC18.4■□□□□ 0.54
CERKLQ49MI3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.4■□□□□ 0.54
CERKLQ49MI3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CERKLQ49MI3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.39■□□□□ 0.54
CERKLQ49MI3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CERKLQ49MI3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CERKLQ49MI3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AL355864.2-201ENST00000447420 863 ntBASIC18.39■□□□□ 0.53
CERKLQ49MI3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC093813.1-201ENST00000605066 256 ntBASIC18.39■□□□□ 0.53
CERKLQ49MI3 MIR6799-201ENST00000620297 69 ntBASIC18.39■□□□□ 0.53
CERKLQ49MI3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC134312.5-201ENST00000568031 1313 ntBASIC18.39■□□□□ 0.53
CERKLQ49MI3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CERKLQ49MI3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.39■□□□□ 0.53
CERKLQ49MI3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 AC012441.1-201ENST00000446669 685 ntBASIC18.38■□□□□ 0.53
CERKLQ49MI3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.38■□□□□ 0.53
CERKLQ49MI3 AC107373.2-201ENST00000607735 490 ntBASIC18.38■□□□□ 0.53
CERKLQ49MI3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CERKLQ49MI3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms