Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.9■□□□□ 0.14
AP1S1P61966 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 DFFBP1-201ENST00000433250 979 ntBASIC15.9■□□□□ 0.14
AP1S1P61966 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
AP1S1P61966 MIR3197-201ENST00000582241 73 ntBASIC15.9■□□□□ 0.14
AP1S1P61966 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.9■□□□□ 0.14
AP1S1P61966 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.9■□□□□ 0.14
AP1S1P61966 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP1S1P61966 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.14
AP1S1P61966 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 PRAL-201ENST00000624952 3286 ntBASIC15.89■□□□□ 0.13
AP1S1P61966 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 TNRC18P3-201ENST00000441896 2691 ntBASIC15.89■□□□□ 0.13
AP1S1P61966 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
AP1S1P61966 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP1S1P61966 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.89■□□□□ 0.13
AP1S1P61966 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.89■□□□□ 0.13
AP1S1P61966 GNAQP1-201ENST00000444815 1067 ntBASIC15.89■□□□□ 0.13
AP1S1P61966 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 KRT18P43-201ENST00000469825 1281 ntBASIC15.89■□□□□ 0.13
AP1S1P61966 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.89■□□□□ 0.13
AP1S1P61966 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.89■□□□□ 0.13
AP1S1P61966 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.89■□□□□ 0.13
AP1S1P61966 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.89■□□□□ 0.13
AP1S1P61966 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.89■□□□□ 0.13
AP1S1P61966 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
AP1S1P61966 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.89■□□□□ 0.13
AP1S1P61966 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S1P61966 AC011270.2-201ENST00000624293 2550 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
AP1S1P61966 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.88■□□□□ 0.13
AP1S1P61966 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 PIN1P1-201ENST00000412108 996 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.88■□□□□ 0.13
AP1S1P61966 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.88■□□□□ 0.13
AP1S1P61966 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.88■□□□□ 0.13
AP1S1P61966 AC055876.2-201ENST00000531834 546 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 AC023310.3-201ENST00000557027 670 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 AC100756.1-201ENST00000562736 682 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 RARRES2P5-201ENST00000564013 466 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 RRP7BP-205ENST00000566851 833 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 AC138749.3-201ENST00000567691 622 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 AC116165.1-201ENST00000611806 668 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms