Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 AC131009.4-201ENST00000624048 1740 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SEC61A1P61619 AC002056.1-201ENST00000395613 760 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 ADH5P3-201ENST00000433842 1137 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.96□□□□□ -0.17
SEC61A1P61619 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.96□□□□□ -0.17
SEC61A1P61619 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 AC091167.2-201ENST00000579581 588 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 MPDU1-223ENST00000582151 728 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.96□□□□□ -0.17
SEC61A1P61619 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.96□□□□□ -0.17
SEC61A1P61619 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.96□□□□□ -0.17
SEC61A1P61619 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SEC61A1P61619 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SEC61A1P61619 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.96□□□□□ -0.18
SEC61A1P61619 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SEC61A1P61619 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SEC61A1P61619 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SEC61A1P61619 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SEC61A1P61619 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.96□□□□□ -0.18
SEC61A1P61619 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
SEC61A1P61619 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC61A1P61619 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.95□□□□□ -0.18
SEC61A1P61619 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.95□□□□□ -0.18
SEC61A1P61619 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 AL355306.1-201ENST00000415580 579 ntBASIC13.95□□□□□ -0.18
SEC61A1P61619 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 TIMM8BP1-201ENST00000452384 211 ntBASIC13.95□□□□□ -0.18
SEC61A1P61619 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.95□□□□□ -0.18
SEC61A1P61619 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SEC61A1P61619 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 AC027612.4-201ENST00000605371 583 ntBASIC13.95□□□□□ -0.18
SEC61A1P61619 OR2I1P-210ENST00000642037 4691 ntBASIC13.95□□□□□ -0.18
SEC61A1P61619 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC61A1P61619 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SEC61A1P61619 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms