Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA4P43681 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CHRNA4P43681 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 TARDBPP1-201ENST00000442013 1203 ntBASIC15.97■□□□□ 0.15
CHRNA4P43681 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.97■□□□□ 0.15
CHRNA4P43681 AC097493.3-201ENST00000509725 367 ntBASIC15.97■□□□□ 0.15
CHRNA4P43681 AC027369.6-201ENST00000525520 931 ntBASIC15.97■□□□□ 0.15
CHRNA4P43681 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.97■□□□□ 0.15
CHRNA4P43681 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.97■□□□□ 0.15
CHRNA4P43681 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.97■□□□□ 0.15
CHRNA4P43681 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.97■□□□□ 0.15
CHRNA4P43681 AL033527.5-202ENST00000641632 1098 ntBASIC15.97■□□□□ 0.15
CHRNA4P43681 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA4P43681 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHRNA4P43681 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.97■□□□□ 0.15
CHRNA4P43681 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHRNA4P43681 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC126177.1-201ENST00000547829 2218 ntBASIC15.96■□□□□ 0.15
CHRNA4P43681 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHRNA4P43681 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 MIR943-201ENST00000401286 94 ntBASIC15.96■□□□□ 0.15
CHRNA4P43681 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC074338.1-201ENST00000416825 156 ntBASIC15.96■□□□□ 0.15
CHRNA4P43681 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA4P43681 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC067863.1-201ENST00000494933 530 ntBASIC15.96■□□□□ 0.15
CHRNA4P43681 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA4P43681 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.96■□□□□ 0.15
CHRNA4P43681 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHRNA4P43681 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CHRNA4P43681 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.96■□□□□ 0.15
CHRNA4P43681 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.96■□□□□ 0.15
CHRNA4P43681 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CHRNA4P43681 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA4P43681 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA4P43681 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.96■□□□□ 0.14
CHRNA4P43681 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.96■□□□□ 0.14
CHRNA4P43681 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA4P43681 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CHRNA4P43681 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA4P43681 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA4P43681 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA4P43681 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.95■□□□□ 0.14
CHRNA4P43681 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA4P43681 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA4P43681 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.95■□□□□ 0.14
CHRNA4P43681 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHRNA4P43681 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms