Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC025048.3-201ENST00000590609 569 ntBASIC14.55□□□□□ -0.08
RFC3P40938 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.55□□□□□ -0.08
RFC3P40938 AC005702.4-201ENST00000618393 416 ntBASIC14.55□□□□□ -0.08
RFC3P40938 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.55□□□□□ -0.08
RFC3P40938 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RFC3P40938 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
RFC3P40938 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 BNIP3P1-202ENST00000550043 1585 ntBASIC14.55□□□□□ -0.08
RFC3P40938 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.55□□□□□ -0.08
RFC3P40938 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.55□□□□□ -0.08
RFC3P40938 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFC3P40938 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 AP003680.1-201ENST00000598970 3660 ntBASIC14.54□□□□□ -0.08
RFC3P40938 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RFC3P40938 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RFC3P40938 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.54□□□□□ -0.08
RFC3P40938 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 GK-202ENST00000378941 458 ntTSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 AC244107.1-201ENST00000442033 332 ntBASIC14.54□□□□□ -0.08
RFC3P40938 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 AC243562.2-201ENST00000561247 970 ntBASIC14.54□□□□□ -0.08
RFC3P40938 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.54□□□□□ -0.08
RFC3P40938 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFC3P40938 SLC7A15P-201ENST00000424028 1363 ntBASIC14.54□□□□□ -0.08
RFC3P40938 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.54□□□□□ -0.08
RFC3P40938 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RFC3P40938 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
RFC3P40938 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFC3P40938 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RFC3P40938 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 AC007950.2-201ENST00000615045 2347 ntBASIC14.53□□□□□ -0.08
RFC3P40938 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 KRT8P37-201ENST00000451609 1420 ntBASIC14.53□□□□□ -0.08
RFC3P40938 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 AC004987.2-201ENST00000395959 1148 ntBASIC14.53□□□□□ -0.08
RFC3P40938 AC087499.6-201ENST00000411576 835 ntBASIC14.53□□□□□ -0.08
RFC3P40938 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.53□□□□□ -0.08
RFC3P40938 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms