Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 AL592309.1-201ENST00000443127 649 ntBASIC17.36■□□□□ 0.37
USP8P40818 DNAJB3-201ENST00000446806 729 ntBASIC17.36■□□□□ 0.37
USP8P40818 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.36■□□□□ 0.37
USP8P40818 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.36■□□□□ 0.37
USP8P40818 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.36■□□□□ 0.37
USP8P40818 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 AC008677.1-201ENST00000519230 1561 ntBASIC17.36■□□□□ 0.37
USP8P40818 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP8P40818 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP8P40818 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
USP8P40818 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 ELL2P1-201ENST00000413990 1906 ntBASIC17.35■□□□□ 0.37
USP8P40818 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 AP000842.3-202ENST00000569238 1080 ntBASIC17.35■□□□□ 0.37
USP8P40818 MIR3687-2-201ENST00000577708 61 ntBASIC17.35■□□□□ 0.37
USP8P40818 AC024267.1-201ENST00000582320 895 ntBASIC17.35■□□□□ 0.37
USP8P40818 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 MIR3687-1-201ENST00000614492 61 ntBASIC17.35■□□□□ 0.37
USP8P40818 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.35■□□□□ 0.37
USP8P40818 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
USP8P40818 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.35■□□□□ 0.37
USP8P40818 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP8P40818 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.34■□□□□ 0.37
USP8P40818 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
USP8P40818 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP8P40818 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.34■□□□□ 0.37
USP8P40818 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 AC142381.1-201ENST00000426099 345 ntBASIC17.34■□□□□ 0.37
USP8P40818 GPX1P2-201ENST00000429271 606 ntBASIC17.34■□□□□ 0.37
USP8P40818 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.34■□□□□ 0.37
USP8P40818 AC245100.5-201ENST00000452108 331 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms