Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.38□□□□□ -0.27
COL8A2P25067 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
COL8A2P25067 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
COL8A2P25067 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.38□□□□□ -0.27
COL8A2P25067 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
COL8A2P25067 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC074338.1-201ENST00000416825 156 ntBASIC13.38□□□□□ -0.27
COL8A2P25067 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.38□□□□□ -0.27
COL8A2P25067 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.38□□□□□ -0.27
COL8A2P25067 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.38□□□□□ -0.27
COL8A2P25067 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.38□□□□□ -0.27
COL8A2P25067 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC123567.1-201ENST00000548294 1261 ntBASIC13.38□□□□□ -0.27
COL8A2P25067 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.38□□□□□ -0.27
COL8A2P25067 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.38□□□□□ -0.27
COL8A2P25067 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 AC092850.2-201ENST00000623821 2697 ntBASIC13.38□□□□□ -0.27
COL8A2P25067 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.38□□□□□ -0.27
COL8A2P25067 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.38□□□□□ -0.27
COL8A2P25067 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COL8A2P25067 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 AC098614.1-201ENST00000368528 745 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 MIR648-201ENST00000385046 94 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 AC098850.1-201ENST00000419919 790 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.37□□□□□ -0.27
COL8A2P25067 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.37□□□□□ -0.27
COL8A2P25067 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
COL8A2P25067 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms