Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.35■□□□□ 0.69
ITGA6P23229 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA6P23229 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 PCDHB19P-201ENST00000570871 2371 ntBASIC19.35■□□□□ 0.69
ITGA6P23229 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITGA6P23229 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ITGA6P23229 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA6P23229 AP003680.1-201ENST00000598970 3660 ntBASIC19.35■□□□□ 0.69
ITGA6P23229 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 AC010491.1-201ENST00000563101 2797 ntBASIC19.34■□□□□ 0.69
ITGA6P23229 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ITGA6P23229 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 AC134312.5-201ENST00000568031 1313 ntBASIC19.34■□□□□ 0.69
ITGA6P23229 AC093525.8-201ENST00000624099 1342 ntBASIC19.34■□□□□ 0.69
ITGA6P23229 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ITGA6P23229 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA6P23229 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA6P23229 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ITGA6P23229 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ITGA6P23229 AC093813.1-201ENST00000605066 256 ntBASIC19.34■□□□□ 0.69
ITGA6P23229 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA6P23229 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.34■□□□□ 0.69
ITGA6P23229 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA6P23229 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA6P23229 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA6P23229 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ITGA6P23229 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.33■□□□□ 0.69
ITGA6P23229 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.33■□□□□ 0.69
ITGA6P23229 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA6P23229 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA6P23229 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.33■□□□□ 0.68
ITGA6P23229 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA6P23229 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA6P23229 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 AL355864.2-201ENST00000447420 863 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 KLF2P4-201ENST00000451959 1225 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 BNIP3P42-201ENST00000454982 569 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA6P23229 AC106760.1-201ENST00000508690 800 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA6P23229 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.33■□□□□ 0.68
ITGA6P23229 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.33■□□□□ 0.68
ITGA6P23229 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA6P23229 BNIP3P29-201ENST00000598302 571 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 AC011447.5-201ENST00000616168 564 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA6P23229 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA6P23229 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ITGA6P23229 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA6P23229 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA6P23229 AL118508.1-201ENST00000613502 2345 ntBASIC19.33■□□□□ 0.68
ITGA6P23229 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ITGA6P23229 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ITGA6P23229 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ITGA6P23229 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA6P23229 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ITGA6P23229 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ITGA6P23229 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA6P23229 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms