Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFX1P22670 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX1P22670 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX1P22670 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFX1P22670 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFX1P22670 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFX1P22670 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.24■□□□□ 0.35
RFX1P22670 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.24■□□□□ 0.35
RFX1P22670 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX1P22670 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFX1P22670 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX1P22670 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.24■□□□□ 0.35
RFX1P22670 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX1P22670 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX1P22670 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.24■□□□□ 0.35
RFX1P22670 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 CYP4F24P-201ENST00000586049 1580 ntBASIC17.23■□□□□ 0.35
RFX1P22670 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.23■□□□□ 0.35
RFX1P22670 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX1P22670 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.23■□□□□ 0.35
RFX1P22670 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 RARRES2P9-201ENST00000565168 469 ntBASIC17.23■□□□□ 0.35
RFX1P22670 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX1P22670 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX1P22670 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RFX1P22670 KRT8P37-201ENST00000451609 1420 ntBASIC17.22■□□□□ 0.35
RFX1P22670 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 AL139384.1-201ENST00000612143 3047 ntBASIC17.22■□□□□ 0.35
RFX1P22670 AL136982.4-201ENST00000437689 1740 ntBASIC17.22■□□□□ 0.35
RFX1P22670 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX1P22670 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RFX1P22670 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 ARSEP1-201ENST00000420443 635 ntBASIC17.22■□□□□ 0.35
RFX1P22670 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX1P22670 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX1P22670 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX1P22670 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX1P22670 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX1P22670 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms