Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN1P18031 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN1P18031 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN1P18031 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.73■□□□□ 0.27
PTPN1P18031 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC140912.1-201ENST00000577171 1054 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC027307.3-201ENST00000594262 1100 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 AC099568.2-201ENST00000609194 695 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 AL391069.4-201ENST00000609583 481 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PTPN1P18031 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 AC025048.6-201ENST00000634326 1161 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
PTPN1P18031 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN1P18031 AC138969.3-201ENST00000546612 1459 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 AC138932.2-201ENST00000548268 1459 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 AC126755.4-201ENST00000549796 1459 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN1P18031 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 AL365203.3-201ENST00000609742 2057 ntBASIC16.73■□□□□ 0.27
PTPN1P18031 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN1P18031 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.72■□□□□ 0.27
PTPN1P18031 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN1P18031 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN1P18031 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN1P18031 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 AP005018.1-201ENST00000525475 301 ntBASIC16.72■□□□□ 0.27
PTPN1P18031 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN1P18031 AL158212.4-201ENST00000624062 1286 ntBASIC16.72■□□□□ 0.27
PTPN1P18031 AC105233.6-201ENST00000642093 218 ntBASIC16.72■□□□□ 0.27
PTPN1P18031 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN1P18031 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN1P18031 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN1P18031 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN1P18031 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN1P18031 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN1P18031 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN1P18031 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms