Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMPD1P17405 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.42■□□□□ 0.38
SMPD1P17405 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.42■□□□□ 0.38
SMPD1P17405 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.42■□□□□ 0.38
SMPD1P17405 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.42■□□□□ 0.38
SMPD1P17405 AL139099.5-201ENST00000635274 300 ntBASIC17.42■□□□□ 0.38
SMPD1P17405 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SMPD1P17405 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 AHCYP2-201ENST00000430630 1300 ntBASIC17.42■□□□□ 0.38
SMPD1P17405 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.42■□□□□ 0.38
SMPD1P17405 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.42■□□□□ 0.38
SMPD1P17405 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.42■□□□□ 0.38
SMPD1P17405 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMPD1P17405 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SMPD1P17405 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.41■□□□□ 0.38
SMPD1P17405 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.41■□□□□ 0.38
SMPD1P17405 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SMPD1P17405 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 AC006033.1-201ENST00000440505 426 ntBASIC17.41■□□□□ 0.38
SMPD1P17405 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.41■□□□□ 0.38
SMPD1P17405 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.41■□□□□ 0.38
SMPD1P17405 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 MIR4741-201ENST00000579822 90 ntBASIC17.41■□□□□ 0.38
SMPD1P17405 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.41■□□□□ 0.38
SMPD1P17405 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 AC069224.1-201ENST00000566372 1715 ntBASIC17.41■□□□□ 0.38
SMPD1P17405 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SMPD1P17405 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMPD1P17405 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.41■□□□□ 0.38
SMPD1P17405 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMPD1P17405 PCDHA14-201ENST00000506751 2298 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SMPD1P17405 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 RNU1-114P-201ENST00000365297 166 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 MIR1202-201ENST00000408529 83 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.4■□□□□ 0.38
SMPD1P17405 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.4■□□□□ 0.38
SMPD1P17405 KLF2P2-201ENST00000416807 1039 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.4■□□□□ 0.38
SMPD1P17405 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SMPD1P17405 RNA5SP486-201ENST00000515961 83 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.4■□□□□ 0.38
SMPD1P17405 AC025181.2-201ENST00000606994 802 ntBASIC17.4■□□□□ 0.38
SMPD1P17405 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.4■□□□□ 0.38
SMPD1P17405 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMPD1P17405 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SMPD1P17405 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.39■□□□□ 0.38
SMPD1P17405 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms