Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCL4P13236 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL4P13236 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CCL4P13236 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL4P13236 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL4P13236 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.82□□□□□ -0.04
CCL4P13236 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCL4P13236 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 AC099548.2-209ENST00000480264 625 ntBASIC14.82□□□□□ -0.04
CCL4P13236 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL4P13236 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 RN7SL560P-201ENST00000577943 264 ntBASIC14.82□□□□□ -0.04
CCL4P13236 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL4P13236 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCL4P13236 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL4P13236 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL4P13236 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.81□□□□□ -0.04
CCL4P13236 CNN2P8-201ENST00000421872 913 ntBASIC14.81□□□□□ -0.04
CCL4P13236 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 PFN1P12-201ENST00000455938 534 ntBASIC14.81□□□□□ -0.04
CCL4P13236 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 AC025279.2-201ENST00000569730 653 ntBASIC14.81□□□□□ -0.04
CCL4P13236 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL4P13236 AC008687.7-202ENST00000637404 953 ntBASIC14.81□□□□□ -0.04
CCL4P13236 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCL4P13236 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL4P13236 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL4P13236 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL4P13236 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms