Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPRFP10586 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPRFP10586 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPRFP10586 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPRFP10586 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPRFP10586 ELK2AP-201ENST00000392510 1007 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 AL662890.1-201ENST00000396818 632 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 NUS1P3-201ENST00000423502 862 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 AC114812.1-204ENST00000449669 728 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 SPTLC1P5-201ENST00000450718 252 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPRFP10586 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPRFP10586 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPRFP10586 DUX4L47-201ENST00000566374 394 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPRFP10586 AL645939.5-201ENST00000606834 243 ntBASIC17.78■□□□□ 0.44
PTPRFP10586 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPRFP10586 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPRFP10586 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPRFP10586 AC007787.1-201ENST00000588095 1583 ntBASIC17.77■□□□□ 0.44
PTPRFP10586 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPRFP10586 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.77■□□□□ 0.44
PTPRFP10586 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.77■□□□□ 0.44
PTPRFP10586 AC007274.2-201ENST00000421675 662 ntBASIC17.77■□□□□ 0.44
PTPRFP10586 HLA-K-203ENST00000430151 1046 ntBASIC17.77■□□□□ 0.44
PTPRFP10586 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.77■□□□□ 0.44
PTPRFP10586 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTPRFP10586 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
PTPRFP10586 AP001002.3-201ENST00000623482 206 ntBASIC17.77■□□□□ 0.44
PTPRFP10586 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPRFP10586 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.77■□□□□ 0.43
PTPRFP10586 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPRFP10586 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.77■□□□□ 0.43
PTPRFP10586 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PTPRFP10586 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPRFP10586 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPRFP10586 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTPRFP10586 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PTPRFP10586 RPS2P36-201ENST00000456516 831 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 AC126915.1-201ENST00000522847 1038 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPRFP10586 AC004466.1-201ENST00000599515 1080 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPRFP10586 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.76■□□□□ 0.43
PTPRFP10586 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PTPRFP10586 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 LINC02447-202ENST00000501888 2146 ntBASIC17.76■□□□□ 0.43
PTPRFP10586 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPRFP10586 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPRFP10586 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms