Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.54■□□□□ 0.08
PEX1O43933 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SNHG9-202ENST00000564014 471 ntBASIC15.54■□□□□ 0.08
PEX1O43933 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.54■□□□□ 0.08
PEX1O43933 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
PEX1O43933 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.54■□□□□ 0.08
PEX1O43933 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.54■□□□□ 0.08
PEX1O43933 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 AC232323.1-201ENST00000540724 2099 ntBASIC15.53■□□□□ 0.08
PEX1O43933 REXO1L5P-201ENST00000622260 2098 ntBASIC15.53■□□□□ 0.08
PEX1O43933 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.53■□□□□ 0.08
PEX1O43933 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.53■□□□□ 0.08
PEX1O43933 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 AC068137.2-201ENST00000605408 478 ntBASIC15.53■□□□□ 0.08
PEX1O43933 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.53■□□□□ 0.08
PEX1O43933 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PEX1O43933 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PEX1O43933 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PEX1O43933 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.52■□□□□ 0.08
PEX1O43933 AC087481.3-201ENST00000602886 1894 ntBASIC15.52■□□□□ 0.08
PEX1O43933 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PEX1O43933 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.52■□□□□ 0.08
PEX1O43933 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PEX1O43933 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.52■□□□□ 0.08
PEX1O43933 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.52■□□□□ 0.08
PEX1O43933 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.52■□□□□ 0.08
PEX1O43933 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.52■□□□□ 0.08
PEX1O43933 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.52■□□□□ 0.08
PEX1O43933 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms