Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 MTND4LP25-201ENST00000570218 163 ntBASIC15.28■□□□□ 0.04
SNPHO15079 MIR3909-201ENST00000579518 119 ntBASIC15.28■□□□□ 0.04
SNPHO15079 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
SNPHO15079 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC15.28■□□□□ 0.04
SNPHO15079 AL031055.1-201ENST00000606362 631 ntBASIC15.28■□□□□ 0.04
SNPHO15079 AC006386.1-201ENST00000619436 415 ntBASIC15.28■□□□□ 0.04
SNPHO15079 AP000770.2-201ENST00000623694 100 ntBASIC15.28■□□□□ 0.04
SNPHO15079 AC020978.9-201ENST00000624380 1141 ntBASIC15.28■□□□□ 0.04
SNPHO15079 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SNPHO15079 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
SNPHO15079 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNPHO15079 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SNPHO15079 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SNPHO15079 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SNPHO15079 RNU1-129P-201ENST00000384064 167 ntBASIC15.27■□□□□ 0.04
SNPHO15079 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.27■□□□□ 0.04
SNPHO15079 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC15.27■□□□□ 0.04
SNPHO15079 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 ACTG1P14-201ENST00000446382 1122 ntBASIC15.27■□□□□ 0.04
SNPHO15079 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 AC109635.5-201ENST00000533593 962 ntBASIC15.27■□□□□ 0.04
SNPHO15079 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC15.27■□□□□ 0.04
SNPHO15079 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC15.27■□□□□ 0.04
SNPHO15079 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 U1.21-201ENST00000580816 167 ntBASIC15.27■□□□□ 0.04
SNPHO15079 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.27■□□□□ 0.04
SNPHO15079 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 AL009183.1-201ENST00000603760 355 ntBASIC15.27■□□□□ 0.04
SNPHO15079 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC15.27■□□□□ 0.04
SNPHO15079 AL691403.2-201ENST00000618460 490 ntBASIC15.27■□□□□ 0.04
SNPHO15079 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.27■□□□□ 0.04
SNPHO15079 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNPHO15079 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC15.27■□□□□ 0.04
SNPHO15079 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.27■□□□□ 0.04
SNPHO15079 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.27■□□□□ 0.03
SNPHO15079 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.27■□□□□ 0.03
SNPHO15079 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SNPHO15079 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SNPHO15079 CICP13-201ENST00000422015 2789 ntBASIC15.27■□□□□ 0.03
SNPHO15079 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 ELL2P1-201ENST00000413990 1906 ntBASIC15.27■□□□□ 0.03
SNPHO15079 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.27■□□□□ 0.03
SNPHO15079 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.27■□□□□ 0.03
SNPHO15079 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNPHO15079 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNPHO15079 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNPHO15079 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.26■□□□□ 0.03
SNPHO15079 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
SNPHO15079 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNPHO15079 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.26■□□□□ 0.03
SNPHO15079 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNPHO15079 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms