Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 MBLAC2-202ENST00000514906 1936 ntBASIC19.43■□□□□ 0.7
RGPD3A6NKT7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.43■□□□□ 0.7
RGPD3A6NKT7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AP000358.1-201ENST00000456260 156 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AC244250.3-201ENST00000620749 366 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AL161773.1-201ENST00000624845 863 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 LYPLA2P1-203ENST00000447689 696 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 E2F3P2-201ENST00000447755 1422 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.42■□□□□ 0.7
RGPD3A6NKT7 AC011477.6-201ENST00000604980 1927 ntBASIC19.42■□□□□ 0.7
RGPD3A6NKT7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 ORAOV1P1-201ENST00000503108 395 ntBASIC19.41■□□□□ 0.7
RGPD3A6NKT7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 MIR4313-201ENST00000580760 101 ntBASIC19.41■□□□□ 0.7
RGPD3A6NKT7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 AC148477.9-201ENST00000623974 539 ntBASIC19.41■□□□□ 0.7
RGPD3A6NKT7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RGPD3A6NKT7 AC244394.1-201ENST00000435000 1665 ntBASIC19.41■□□□□ 0.7
RGPD3A6NKT7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 MIR557-201ENST00000385239 98 ntBASIC19.4■□□□□ 0.7
RGPD3A6NKT7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 DUX4L46-201ENST00000566845 751 ntBASIC19.4■□□□□ 0.7
RGPD3A6NKT7 PHBP15-201ENST00000574228 665 ntBASIC19.4■□□□□ 0.7
RGPD3A6NKT7 AC005962.1-201ENST00000584100 773 ntBASIC19.4■□□□□ 0.7
RGPD3A6NKT7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.4■□□□□ 0.7
RGPD3A6NKT7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms