Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 AC013268.4-201ENST00000637413 2228 ntBASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGC3Q9UN70 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 KRT18P64-201ENST00000434946 1219 ntBASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC004890.2-204ENST00000481968 304 ntBASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC106028.4-201ENST00000614509 607 ntBASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC112693.3-201ENST00000624819 1983 ntBASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGC3Q9UN70 AC073347.1-201ENST00000421633 2643 ntBASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AC114501.2-201ENST00000439631 535 ntBASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AC009407.1-201ENST00000568958 598 ntBASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AF228730.6-201ENST00000641497 218 ntBASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AC084121.3-201ENST00000641716 218 ntBASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 BTBD7P1-201ENST00000447253 1453 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms