Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AC016700.1-201ENST00000429424 312 ntBASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 MIR4706-201ENST00000582134 82 ntBASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AC244157.2-201ENST00000616239 1006 ntBASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNRF3Q9ULT6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 CYP46A4P-201ENST00000414953 267 ntBASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AC079178.1-201ENST00000420915 656 ntBASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 IMP3P2-201ENST00000489760 475 ntBASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AC097724.1-201ENST00000609581 426 ntBASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AC148477.4-201ENST00000613430 1793 ntBASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNRF3Q9ULT6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ZNRF3Q9ULT6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNRF3Q9ULT6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ZNRF3Q9ULT6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 AC011477.6-201ENST00000604980 1927 ntBASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 AC007663.3-201ENST00000609632 465 ntBASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 AC091812.3-201ENST00000621362 345 ntBASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 PRSS30P-206ENST00000641773 873 ntBASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNRF3Q9ULT6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 NKAIN1P1-201ENST00000435754 582 ntBASIC18.75■□□□□ 0.59
ZNRF3Q9ULT6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms