Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AL133267.1-201ENST00000398220 340 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 COX5BP8-201ENST00000416911 349 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AC092552.1-201ENST00000547243 906 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CTBP2P3-201ENST00000585629 1255 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AC000095.1-201ENST00000603208 874 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 AC005034.1-201ENST00000426657 489 ntBASIC16.67■□□□□ 0.26
CDH9Q9ULB4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 AL035252.4-201ENST00000624174 288 ntBASIC16.67■□□□□ 0.26
CDH9Q9ULB4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 AC063926.2-201ENST00000623766 1308 ntBASIC16.67■□□□□ 0.26
CDH9Q9ULB4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH9Q9ULB4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH9Q9ULB4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms