Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.93■□□□□ 0.78
SCN11AQ9UI33 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN11AQ9UI33 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN11AQ9UI33 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AC099398.1-201ENST00000567919 2776 ntBASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 RPL5P21-201ENST00000404620 815 ntBASIC19.91■□□□□ 0.78
SCN11AQ9UI33 GHSR-202ENST00000427970 912 ntBASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 AC004466.1-201ENST00000599515 1080 ntBASIC19.91■□□□□ 0.78
SCN11AQ9UI33 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN11AQ9UI33 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 AC091271.1-201ENST00000611877 1162 ntBASIC19.9■□□□□ 0.78
SCN11AQ9UI33 AL603764.1-201ENST00000636452 321 ntBASIC19.9■□□□□ 0.78
SCN11AQ9UI33 AC068587.10-201ENST00000641210 219 ntBASIC19.9■□□□□ 0.78
SCN11AQ9UI33 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN11AQ9UI33 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms