Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 AC091812.3-201ENST00000621362 345 ntBASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLC52A1Q9NWF4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AGGF1P2-201ENST00000426656 2106 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 POM121L8P-201ENST00000417732 1281 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 POM121L9P-203ENST00000441984 1285 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AC004066.1-201ENST00000502488 802 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AC044849.1-201ENST00000519737 1188 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 PPY2P-201ENST00000582808 702 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 AC097724.1-201ENST00000609581 426 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 ZACNP1-201ENST00000612259 710 ntBASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SLC52A1Q9NWF4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SLC52A1Q9NWF4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 NDUFAB1P1-201ENST00000404262 460 ntBASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 CYP46A4P-201ENST00000414953 267 ntBASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 AC073413.1-201ENST00000603927 732 ntBASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 AL603764.1-201ENST00000636452 321 ntBASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC22.26■■□□□ 1.15
SLC52A1Q9NWF4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AL008707.1-201ENST00000422498 534 ntBASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 EIF3FP3-201ENST00000434851 1086 ntBASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AP003171.2-201ENST00000528208 925 ntBASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 MIR4722-201ENST00000578292 60 ntBASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 AL645728.2-202ENST00000641679 227 ntBASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SLC52A1Q9NWF4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms