Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ELL3Q9HB65 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.93□□□□□ -0.18
ELL3Q9HB65 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.93□□□□□ -0.18
ELL3Q9HB65 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
ELL3Q9HB65 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ELL3Q9HB65 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ELL3Q9HB65 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.93□□□□□ -0.18
ELL3Q9HB65 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ELL3Q9HB65 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ELL3Q9HB65 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 HAUS4P1-201ENST00000406739 1145 ntBASIC13.92□□□□□ -0.18
ELL3Q9HB65 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 RHOQP3-201ENST00000437982 621 ntBASIC13.92□□□□□ -0.18
ELL3Q9HB65 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 AC104640.1-201ENST00000562617 2109 ntBASIC13.92□□□□□ -0.18
ELL3Q9HB65 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ELL3Q9HB65 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.92□□□□□ -0.18
ELL3Q9HB65 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 AC126177.1-201ENST00000547829 2218 ntBASIC13.91□□□□□ -0.18
ELL3Q9HB65 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 AC092919.2-201ENST00000623631 1645 ntBASIC13.91□□□□□ -0.18
ELL3Q9HB65 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MIR3909-201ENST00000579518 119 ntBASIC13.91□□□□□ -0.18
ELL3Q9HB65 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 AC007064.4-201ENST00000637740 555 ntBASIC13.91□□□□□ -0.18
ELL3Q9HB65 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ELL3Q9HB65 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ELL3Q9HB65 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms