Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC008738.7-201ENST00000609744 511 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC092850.2-201ENST00000623821 2697 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 AC105917.1-201ENST00000506637 2539 ntBASIC13.16□□□□□ -0.3
GAFA1Q96PS6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GAFA1Q96PS6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 KRT18P64-201ENST00000434946 1219 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 RPL13P2-201ENST00000440687 659 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 INGX-202ENST00000489074 768 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AL355385.1-201ENST00000606123 409 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC004461.2-201ENST00000629517 803 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC004840.1-201ENST00000636359 365 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AF228730.6-201ENST00000641497 218 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC084121.3-201ENST00000641716 218 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 AC127383.1-201ENST00000444697 1800 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 BTBD7P1-201ENST00000447253 1453 ntBASIC13.15□□□□□ -0.3
GAFA1Q96PS6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GAFA1Q96PS6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAFA1Q96PS6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
GAFA1Q96PS6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAFA1Q96PS6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
GAFA1Q96PS6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
GAFA1Q96PS6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms