Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 BNIP3P1-202ENST00000550043 1585 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 PCDHA3-202ENST00000532566 4594 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AL355306.1-201ENST00000415580 579 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AL671277.1-201ENST00000429656 993 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AL135744.1-201ENST00000565098 629 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC027307.2-201ENST00000591252 911 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AC027601.4-201ENST00000611259 610 ntBASIC17.93■□□□□ 0.46
SMARCE1Q969G3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMARCE1Q969G3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 AC138035.3-201ENST00000622706 2791 ntBASIC17.92■□□□□ 0.46
SMARCE1Q969G3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.92■□□□□ 0.46
SMARCE1Q969G3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 TFAMP1-201ENST00000412727 736 ntBASIC17.92■□□□□ 0.46
SMARCE1Q969G3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 AC091812.2-201ENST00000619081 385 ntBASIC17.92■□□□□ 0.46
SMARCE1Q969G3 AC008267.7-201ENST00000624570 1194 ntBASIC17.92■□□□□ 0.46
SMARCE1Q969G3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMARCE1Q969G3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.91■□□□□ 0.46
SMARCE1Q969G3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms