Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATL1Q8WXF7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.54■□□□□ 0.08
ATL1Q8WXF7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATL1Q8WXF7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATL1Q8WXF7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 DNAJB3-202ENST00000449667 1266 ntBASIC15.53■□□□□ 0.08
ATL1Q8WXF7 PHKG1P2-201ENST00000457537 863 ntBASIC15.53■□□□□ 0.08
ATL1Q8WXF7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.53■□□□□ 0.08
ATL1Q8WXF7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.53■□□□□ 0.08
ATL1Q8WXF7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.52■□□□□ 0.08
ATL1Q8WXF7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 FO393414.2-201ENST00000405153 598 ntBASIC15.52■□□□□ 0.08
ATL1Q8WXF7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 RN7SL828P-201ENST00000607615 303 ntBASIC15.52■□□□□ 0.08
ATL1Q8WXF7 AL691403.2-201ENST00000618460 490 ntBASIC15.52■□□□□ 0.08
ATL1Q8WXF7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATL1Q8WXF7 LINC00628-201ENST00000628516 1289 ntBASIC15.52■□□□□ 0.08
ATL1Q8WXF7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATL1Q8WXF7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATL1Q8WXF7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms