Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SCG3Q8WXD2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 AC126755.1-201ENST00000525846 6405 ntBASIC16.33■□□□□ 0.21
SCG3Q8WXD2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCG3Q8WXD2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 KLF2P3-201ENST00000451977 1087 ntBASIC16.33■□□□□ 0.2
SCG3Q8WXD2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC027307.2-201ENST00000591252 911 ntBASIC16.33■□□□□ 0.2
SCG3Q8WXD2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AC084121.4-201ENST00000641598 221 ntBASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AF228730.8-201ENST00000642140 221 ntBASIC16.33■□□□□ 0.2
SCG3Q8WXD2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCG3Q8WXD2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 BASP1P1-201ENST00000430708 665 ntBASIC16.32■□□□□ 0.2
SCG3Q8WXD2 MIR600HG-201ENST00000449175 5984 ntBASIC16.32■□□□□ 0.2
SCG3Q8WXD2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.32■□□□□ 0.2
SCG3Q8WXD2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCG3Q8WXD2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms