Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 BASP1P1-201ENST00000430708 665 ntBASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 ACA64.2-201ENST00000459014 129 ntBASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 AC104794.3-201ENST00000566840 1248 ntBASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHROOM3Q8TF72 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SPDYE17-201ENST00000412399 783 ntBASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 AC009477.1-201ENST00000452936 217 ntBASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SPDYE18-201ENST00000510091 1050 ntBASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 AC104640.1-201ENST00000562617 2109 ntBASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.1■□□□□ 0.17
SHROOM3Q8TF72 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 LINC00554-201ENST00000564841 3011 ntBASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 SERBP1P3-201ENST00000459980 809 ntBASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 HILS1-202ENST00000545329 423 ntBASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AC015910.1-201ENST00000579400 975 ntBASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 AC008738.7-201ENST00000609744 511 ntBASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHROOM3Q8TF72 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms