Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AC126915.1-201ENST00000522847 1038 ntBASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL451050.2-201ENST00000606967 682 ntBASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL354989.2-201ENST00000435838 1540 ntBASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 AL023775.1-201ENST00000454907 1746 ntBASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHDC9Q8NEP7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 AC025181.2-201ENST00000606994 802 ntBASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KLHDC9Q8NEP7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 EIF4HP1-201ENST00000453115 687 ntBASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 CHMP4BP1-201ENST00000556017 588 ntBASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms