Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
C3orf56Q8N813 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
C3orf56Q8N813 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 HINT2P1-201ENST00000419438 481 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AC012441.1-201ENST00000446669 685 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 UPF3AP2-201ENST00000457924 1132 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 AKR7A2P1-201ENST00000460134 915 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AC124947.2-201ENST00000547118 1133 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AC016629.1-201ENST00000596579 586 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 AL607033.1-201ENST00000623900 1599 ntBASIC12.42□□□□□ -0.42
C3orf56Q8N813 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
C3orf56Q8N813 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
C3orf56Q8N813 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.41□□□□□ -0.42
C3orf56Q8N813 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 MIR663B-201ENST00000408361 115 ntBASIC12.41□□□□□ -0.42
C3orf56Q8N813 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
C3orf56Q8N813 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
C3orf56Q8N813 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms