Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.15■□□□□ 0.98
NME9Q86XW9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NME9Q86XW9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NME9Q86XW9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NME9Q86XW9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NME9Q86XW9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NME9Q86XW9 AL138709.1-201ENST00000614840 1693 ntBASIC21.15■□□□□ 0.98
NME9Q86XW9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.15■□□□□ 0.98
NME9Q86XW9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
NME9Q86XW9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NME9Q86XW9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NME9Q86XW9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NME9Q86XW9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.14■□□□□ 0.98
NME9Q86XW9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.14■□□□□ 0.98
NME9Q86XW9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NME9Q86XW9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.14■□□□□ 0.97
NME9Q86XW9 BRWD1P1-201ENST00000401091 371 ntBASIC21.14■□□□□ 0.97
NME9Q86XW9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.14■□□□□ 0.97
NME9Q86XW9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.14■□□□□ 0.97
NME9Q86XW9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC145423.3-201ENST00000615987 467 ntBASIC21.14■□□□□ 0.97
NME9Q86XW9 MIR6787-201ENST00000616675 61 ntBASIC21.14■□□□□ 0.97
NME9Q86XW9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NME9Q86XW9 AC006449.5-201ENST00000610658 2098 ntBASIC21.14■□□□□ 0.97
NME9Q86XW9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NME9Q86XW9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NME9Q86XW9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
NME9Q86XW9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.13■□□□□ 0.97
NME9Q86XW9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 AC078819.1-201ENST00000547454 765 ntBASIC21.13■□□□□ 0.97
NME9Q86XW9 AC012085.1-201ENST00000548270 765 ntBASIC21.13■□□□□ 0.97
NME9Q86XW9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.13■□□□□ 0.97
NME9Q86XW9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.13■□□□□ 0.97
NME9Q86XW9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NME9Q86XW9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.13■□□□□ 0.97
NME9Q86XW9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.13■□□□□ 0.97
NME9Q86XW9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.13■□□□□ 0.97
NME9Q86XW9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NME9Q86XW9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.12■□□□□ 0.97
NME9Q86XW9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
NME9Q86XW9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NME9Q86XW9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.12■□□□□ 0.97
NME9Q86XW9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.12■□□□□ 0.97
NME9Q86XW9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.12■□□□□ 0.97
NME9Q86XW9 C2orf27AP3-201ENST00000434123 579 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 YBX1P6-201ENST00000442962 1002 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AL590640.2-201ENST00000457038 527 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 ZNF767P-206ENST00000513792 565 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.12■□□□□ 0.97
NME9Q86XW9 AC010328.2-201ENST00000597698 1111 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AL606495.2-201ENST00000605867 535 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.12■□□□□ 0.97
NME9Q86XW9 AP005019.2-201ENST00000615104 511 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AL354718.3-201ENST00000616414 581 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 CR382287.1-201ENST00000623954 586 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AC008687.7-202ENST00000637404 953 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 AC112504.1-201ENST00000623415 1841 ntBASIC21.12■□□□□ 0.97
NME9Q86XW9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.12■□□□□ 0.97
NME9Q86XW9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.12■□□□□ 0.97
NME9Q86XW9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NME9Q86XW9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.12■□□□□ 0.97
NME9Q86XW9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NME9Q86XW9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms