Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PDIA3P2-201ENST00000428073 158 ntBASIC10.82□□□□□ -0.68
CSMD3Q7Z407 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.82□□□□□ -0.68
CSMD3Q7Z407 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 AP005019.2-201ENST00000615104 511 ntBASIC10.82□□□□□ -0.68
CSMD3Q7Z407 HLA-C-210ENST00000640219 976 ntBASIC10.82□□□□□ -0.68
CSMD3Q7Z407 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CSMD3Q7Z407 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 SERF2-206ENST00000409291 807 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 RN7SL713P-201ENST00000582127 302 ntBASIC10.81□□□□□ -0.68
CSMD3Q7Z407 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 RN7SL736P-201ENST00000613111 269 ntBASIC10.81□□□□□ -0.68
CSMD3Q7Z407 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AL353726.2-201ENST00000623259 884 ntBASIC10.81□□□□□ -0.68
CSMD3Q7Z407 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 WT1-AS_6.1-201ENST00000614919 121 ntBASIC10.81□□□□□ -0.68
CSMD3Q7Z407 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC013355.1-201ENST00000562625 723 ntBASIC10.81□□□□□ -0.68
CSMD3Q7Z407 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
CSMD3Q7Z407 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC025181.2-201ENST00000606994 802 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AP001282.1-201ENST00000531301 1499 ntBASIC10.8□□□□□ -0.68
CSMD3Q7Z407 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.8□□□□□ -0.68
CSMD3Q7Z407 KLF2P2-201ENST00000416807 1039 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms