Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 OR2I1P-210ENST00000642037 4691 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 AC026748.1-201ENST00000624349 3251 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 MYO15B-237ENST00000642007 4893 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 IGLL3P-201ENST00000412472 434 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 AC023141.13-201ENST00000604991 943 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 AC018892.3-201ENST00000623986 2499 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 CICP23-201ENST00000605013 2741 ntBASIC14.4□□□□□ -0.1
SHFQ7M4L6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHFQ7M4L6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHFQ7M4L6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AC139749.1-202ENST00000617529 3139 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AC092474.2-201ENST00000424288 719 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 RNA5SP415-201ENST00000517246 115 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AP001005.1-201ENST00000571755 1248 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AL049840.3-201ENST00000602669 611 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 AL078644.1-201ENST00000609881 752 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 AC010507.1-201ENST00000633895 436 ntBASIC14.39□□□□□ -0.11
SHFQ7M4L6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.39□□□□□ -0.11
SHFQ7M4L6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHFQ7M4L6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms