Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 AC105233.2-201ENST00000523697 349 ntBASIC15.17■□□□□ 0.02
PHC1P78364 AF228730.5-201ENST00000530288 346 ntBASIC15.17■□□□□ 0.02
PHC1P78364 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PHC1P78364 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.17■□□□□ 0.02
PHC1P78364 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.17■□□□□ 0.02
PHC1P78364 AC027307.2-201ENST00000591252 911 ntBASIC15.17■□□□□ 0.02
PHC1P78364 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.17■□□□□ 0.02
PHC1P78364 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PHC1P78364 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 C18orf15-201ENST00000623680 2534 ntBASIC15.17■□□□□ 0.02
PHC1P78364 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.17■□□□□ 0.02
PHC1P78364 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.17■□□□□ 0.02
PHC1P78364 FLJ16779-201ENST00000612722 7638 ntBASIC15.17■□□□□ 0.02
PHC1P78364 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.17■□□□□ 0.02
PHC1P78364 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHC1P78364 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.16■□□□□ 0.02
PHC1P78364 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
PHC1P78364 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.16■□□□□ 0.02
PHC1P78364 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.16■□□□□ 0.02
PHC1P78364 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.16■□□□□ 0.02
PHC1P78364 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PHC1P78364 AC140113.2-201ENST00000604370 208 ntBASIC15.16■□□□□ 0.02
PHC1P78364 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
PHC1P78364 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PHC1P78364 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHC1P78364 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 AKAP8P1-201ENST00000434743 1349 ntBASIC15.16■□□□□ 0.02
PHC1P78364 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHC1P78364 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.15■□□□□ 0.02
PHC1P78364 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
PHC1P78364 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.15■□□□□ 0.02
PHC1P78364 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.15■□□□□ 0.02
PHC1P78364 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHC1P78364 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms