Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.7■□□□□ 0.26
USP46P62068 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
USP46P62068 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
USP46P62068 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.69■□□□□ 0.26
USP46P62068 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 AL391825.1-201ENST00000457671 1364 ntBASIC16.69■□□□□ 0.26
USP46P62068 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.69■□□□□ 0.26
USP46P62068 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 AC098850.1-201ENST00000419919 790 ntBASIC16.69■□□□□ 0.26
USP46P62068 KRT18P64-201ENST00000434946 1219 ntBASIC16.69■□□□□ 0.26
USP46P62068 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 GAPDHP21-201ENST00000450301 1010 ntBASIC16.69■□□□□ 0.26
USP46P62068 PHKG1P2-201ENST00000457537 863 ntBASIC16.69■□□□□ 0.26
USP46P62068 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.69■□□□□ 0.26
USP46P62068 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.69■□□□□ 0.26
USP46P62068 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 HNRNPUP1-201ENST00000554987 333 ntBASIC16.69■□□□□ 0.26
USP46P62068 AKR1B10P2-201ENST00000577332 927 ntBASIC16.69■□□□□ 0.26
USP46P62068 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
USP46P62068 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.69■□□□□ 0.26
USP46P62068 AC007431.3-201ENST00000623221 587 ntBASIC16.69■□□□□ 0.26
USP46P62068 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
USP46P62068 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
USP46P62068 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
USP46P62068 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.69■□□□□ 0.26
USP46P62068 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
USP46P62068 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
USP46P62068 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
USP46P62068 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
USP46P62068 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.68■□□□□ 0.26
USP46P62068 COX5BP8-201ENST00000416911 349 ntBASIC16.68■□□□□ 0.26
USP46P62068 NME2P1-201ENST00000426182 414 ntBASIC16.68■□□□□ 0.26
USP46P62068 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 AC055876.2-201ENST00000531834 546 ntBASIC16.68■□□□□ 0.26
USP46P62068 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.68■□□□□ 0.26
USP46P62068 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 TIMM17BP1-201ENST00000545713 516 ntBASIC16.68■□□□□ 0.26
USP46P62068 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
USP46P62068 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms