Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
CLDN6P56747 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLDN6P56747 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN6P56747 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 REXO1L8P-201ENST00000604378 1897 ntBASIC15.18■□□□□ 0.02
CLDN6P56747 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN6P56747 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN6P56747 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN6P56747 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CLDN6P56747 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 AC012441.1-201ENST00000446669 685 ntBASIC15.17■□□□□ 0.02
CLDN6P56747 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN6P56747 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN6P56747 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN6P56747 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN6P56747 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN6P56747 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN6P56747 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN6P56747 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN6P56747 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.16■□□□□ 0.02
CLDN6P56747 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLDN6P56747 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 IGHJ2P-201ENST00000454480 60 ntBASIC15.16■□□□□ 0.02
CLDN6P56747 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 ENPP7P5-201ENST00000541031 1031 ntBASIC15.16■□□□□ 0.02
CLDN6P56747 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.16■□□□□ 0.02
CLDN6P56747 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN6P56747 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN6P56747 AC105020.1-201ENST00000435356 2205 ntBASIC15.16■□□□□ 0.02
CLDN6P56747 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN6P56747 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms