Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.8□□□□□ -0.52
CMC4P56277 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 TSSK5P-201ENST00000423978 907 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.8□□□□□ -0.52
CMC4P56277 HIST3H2BA-201ENST00000436555 524 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC114501.2-201ENST00000439631 535 ntBASIC11.8□□□□□ -0.52
CMC4P56277 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 AC009477.1-201ENST00000452936 217 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.8□□□□□ -0.52
CMC4P56277 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 AC025048.3-201ENST00000590609 569 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 AC005498.2-205ENST00000593218 784 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 AC005702.4-201ENST00000618393 416 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC092053.3-201ENST00000641308 4975 ntBASIC11.8□□□□□ -0.52
CMC4P56277 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 AC138969.3-201ENST00000546612 1459 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC138932.2-201ENST00000548268 1459 ntBASIC11.8□□□□□ -0.52
CMC4P56277 AC126755.4-201ENST00000549796 1459 ntBASIC11.8□□□□□ -0.52
CMC4P56277 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CMC4P56277 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.8□□□□□ -0.52
CMC4P56277 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 AC092364.2-201ENST00000596710 2692 ntBASIC11.8□□□□□ -0.52
CMC4P56277 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.8□□□□□ -0.52
CMC4P56277 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 AL603832.2-201ENST00000566195 2125 ntBASIC11.8□□□□□ -0.52
CMC4P56277 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CMC4P56277 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 MEIS3P1-201ENST00000495167 958 ntBASIC11.79□□□□□ -0.52
CMC4P56277 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AC135586.1-201ENST00000539323 574 ntBASIC11.79□□□□□ -0.52
CMC4P56277 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 AL512361.1-201ENST00000554200 418 ntBASIC11.79□□□□□ -0.52
CMC4P56277 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.79□□□□□ -0.52
CMC4P56277 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CMC4P56277 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 AC092364.2-202ENST00000597012 1073 ntBASIC11.79□□□□□ -0.52
CMC4P56277 AL844908.2-201ENST00000609461 460 ntBASIC11.79□□□□□ -0.52
CMC4P56277 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.79□□□□□ -0.52
CMC4P56277 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CMC4P56277 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms