Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLCN3P51790 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLCN3P51790 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLCN3P51790 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCN3P51790 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 AC010491.1-201ENST00000563101 2797 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 AC134915.1-201ENST00000426461 574 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 AC007274.1-201ENST00000439805 662 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN3P51790 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCN3P51790 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN3P51790 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.33■□□□□ 0.36
CLCN3P51790 AC000095.1-201ENST00000603208 874 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCN3P51790 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCN3P51790 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCN3P51790 AC112504.1-201ENST00000623415 1841 ntBASIC17.33■□□□□ 0.36
CLCN3P51790 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLCN3P51790 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCN3P51790 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLCN3P51790 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 AL603832.2-201ENST00000566195 2125 ntBASIC17.32■□□□□ 0.36
CLCN3P51790 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN3P51790 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCN3P51790 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN3P51790 USP32P1-208ENST00000506594 1164 ntBASIC17.32■□□□□ 0.36
CLCN3P51790 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.32■□□□□ 0.36
CLCN3P51790 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN3P51790 AC120045.2-201ENST00000567334 178 ntBASIC17.32■□□□□ 0.36
CLCN3P51790 AC106886.1-201ENST00000568660 600 ntBASIC17.32■□□□□ 0.36
CLCN3P51790 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN3P51790 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.32■□□□□ 0.36
CLCN3P51790 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCN3P51790 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN3P51790 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCN3P51790 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLCN3P51790 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCN3P51790 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN3P51790 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN3P51790 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCN3P51790 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN3P51790 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 CROCCP4-201ENST00000457096 498 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN3P51790 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLCN3P51790 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCN3P51790 MIR5189-201ENST00000577370 114 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 AC015936.2-201ENST00000593177 259 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCN3P51790 AL512343.1-201ENST00000605837 169 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 AC017083.2-201ENST00000608069 979 ntBASIC17.31■□□□□ 0.36
CLCN3P51790 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCN3P51790 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms