Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPFP49454 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CENPFP49454 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.52■□□□□ 0.4
CENPFP49454 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPFP49454 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CENPFP49454 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.52■□□□□ 0.4
CENPFP49454 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CENPFP49454 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
CENPFP49454 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.52■□□□□ 0.39
CENPFP49454 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CENPFP49454 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPFP49454 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.52■□□□□ 0.39
CENPFP49454 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 AC007274.2-201ENST00000421675 662 ntBASIC17.51■□□□□ 0.39
CENPFP49454 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPFP49454 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CENPFP49454 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.51■□□□□ 0.39
CENPFP49454 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CENPFP49454 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 PDIA3P2-201ENST00000428073 158 ntBASIC17.51■□□□□ 0.39
CENPFP49454 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.51■□□□□ 0.39
CENPFP49454 IGLV3-15-201ENST00000518356 244 ntBASIC17.51■□□□□ 0.39
CENPFP49454 AC103988.2-201ENST00000561804 725 ntBASIC17.51■□□□□ 0.39
CENPFP49454 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPFP49454 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPFP49454 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CENPFP49454 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPFP49454 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPFP49454 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPFP49454 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPFP49454 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 AC100757.4-201ENST00000626934 759 ntBASIC17.51■□□□□ 0.39
CENPFP49454 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPFP49454 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 GAPDHP40-201ENST00000505218 1006 ntBASIC17.5■□□□□ 0.39
CENPFP49454 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPFP49454 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CENPFP49454 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.5■□□□□ 0.39
CENPFP49454 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 HIST2H2BB-201ENST00000449108 381 ntBASIC17.5■□□□□ 0.39
CENPFP49454 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CENPFP49454 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.5■□□□□ 0.39
CENPFP49454 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPFP49454 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPFP49454 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPFP49454 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CENPFP49454 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPFP49454 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CENPFP49454 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 RPSAP31-201ENST00000416648 895 ntBASIC17.49■□□□□ 0.39
CENPFP49454 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 AC091544.8-201ENST00000619490 361 ntBASIC17.49■□□□□ 0.39
CENPFP49454 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPFP49454 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CENPFP49454 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CENPFP49454 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms