Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 KRT8P19-201ENST00000551916 1455 ntBASIC15.6■□□□□ 0.09
CXCL12P48061 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CXCL12P48061 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCL12P48061 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCL12P48061 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCL12P48061 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.6■□□□□ 0.09
CXCL12P48061 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.6■□□□□ 0.09
CXCL12P48061 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.6■□□□□ 0.09
CXCL12P48061 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCL12P48061 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.6■□□□□ 0.09
CXCL12P48061 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CXCL12P48061 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCL12P48061 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCL12P48061 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CXCL12P48061 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CXCL12P48061 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CXCL12P48061 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 MIR769-201ENST00000390225 118 ntBASIC15.59■□□□□ 0.09
CXCL12P48061 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 KLF2P2-201ENST00000416807 1039 ntBASIC15.59■□□□□ 0.09
CXCL12P48061 HSPB1P2-201ENST00000448722 546 ntBASIC15.59■□□□□ 0.09
CXCL12P48061 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CXCL12P48061 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCL12P48061 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCL12P48061 MIR4722-201ENST00000578292 60 ntBASIC15.59■□□□□ 0.09
CXCL12P48061 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCL12P48061 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCL12P48061 CU633904.3-201ENST00000624042 1029 ntBASIC15.59■□□□□ 0.09
CXCL12P48061 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCL12P48061 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCL12P48061 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CXCL12P48061 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CXCL12P48061 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CXCL12P48061 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CXCL12P48061 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CXCL12P48061 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
CXCL12P48061 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CXCL12P48061 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CXCL12P48061 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCL12P48061 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CXCL12P48061 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCL12P48061 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCL12P48061 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCL12P48061 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCL12P48061 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms