Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.38■□□□□ 0.37
HTTP42858 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 AC009093.2-202ENST00000620513 2079 ntBASIC17.38■□□□□ 0.37
HTTP42858 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.38■□□□□ 0.37
HTTP42858 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 TMCO5B-205ENST00000530020 894 ntBASIC17.38■□□□□ 0.37
HTTP42858 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.38■□□□□ 0.37
HTTP42858 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.38■□□□□ 0.37
HTTP42858 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTTP42858 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 FAM8A4P-201ENST00000435433 1213 ntBASIC17.38■□□□□ 0.37
HTTP42858 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.38■□□□□ 0.37
HTTP42858 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.38■□□□□ 0.37
HTTP42858 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.38■□□□□ 0.37
HTTP42858 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
HTTP42858 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HTTP42858 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.38■□□□□ 0.37
HTTP42858 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTTP42858 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTTP42858 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 AP001282.1-201ENST00000531301 1499 ntBASIC17.37■□□□□ 0.37
HTTP42858 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.37■□□□□ 0.37
HTTP42858 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.37■□□□□ 0.37
HTTP42858 AL162426.1-201ENST00000624141 743 ntBASIC17.37■□□□□ 0.37
HTTP42858 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HTTP42858 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HTTP42858 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.37■□□□□ 0.37
HTTP42858 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.37■□□□□ 0.37
HTTP42858 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HTTP42858 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HTTP42858 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 AL662844.4-201ENST00000606367 2838 ntBASIC17.37■□□□□ 0.37
HTTP42858 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTTP42858 INE2-201ENST00000630399 1874 ntBASIC17.37■□□□□ 0.37
HTTP42858 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 AC073150.1-201ENST00000450406 1084 ntBASIC17.36■□□□□ 0.37
HTTP42858 RPL18P13-201ENST00000478088 569 ntBASIC17.36■□□□□ 0.37
HTTP42858 AC005740.2-201ENST00000511085 419 ntBASIC17.36■□□□□ 0.37
HTTP42858 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 AC007718.1-201ENST00000621078 280 ntBASIC17.36■□□□□ 0.37
HTTP42858 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
HTTP42858 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.36■□□□□ 0.37
HTTP42858 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HTTP42858 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 AL136309.1-201ENST00000403917 691 ntBASIC17.36■□□□□ 0.37
HTTP42858 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 AC106820.3-201ENST00000561653 397 ntBASIC17.36■□□□□ 0.37
HTTP42858 MIR4683-201ENST00000579659 81 ntBASIC17.36■□□□□ 0.37
HTTP42858 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 AL450472.2-201ENST00000603663 1156 ntBASIC17.36■□□□□ 0.37
HTTP42858 AC105137.3-201ENST00000617588 984 ntBASIC17.36■□□□□ 0.37
HTTP42858 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.36■□□□□ 0.37
HTTP42858 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTTP42858 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.36■□□□□ 0.37
HTTP42858 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.36■□□□□ 0.37
HTTP42858 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms