Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
KRT9P35527 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT9P35527 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
KRT9P35527 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 CICP24-201ENST00000605464 2705 ntBASIC17.4■□□□□ 0.38
KRT9P35527 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT9P35527 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KRT9P35527 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT9P35527 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT9P35527 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.39■□□□□ 0.38
KRT9P35527 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT9P35527 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT9P35527 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KRT9P35527 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT9P35527 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 YBX2P1-201ENST00000394192 760 ntBASIC17.39■□□□□ 0.37
KRT9P35527 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
KRT9P35527 AL135744.1-201ENST00000565098 629 ntBASIC17.39■□□□□ 0.37
KRT9P35527 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.39■□□□□ 0.37
KRT9P35527 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT9P35527 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
KRT9P35527 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KRT9P35527 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT9P35527 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT9P35527 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KRT9P35527 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT9P35527 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT9P35527 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KRT9P35527 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT9P35527 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT9P35527 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.38■□□□□ 0.37
KRT9P35527 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.38■□□□□ 0.37
KRT9P35527 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms