Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.09□□□□□ -0.15
CTLA4P16410 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.09□□□□□ -0.15
CTLA4P16410 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 HNRNPUP1-201ENST00000554987 333 ntBASIC14.09□□□□□ -0.15
CTLA4P16410 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.09□□□□□ -0.15
CTLA4P16410 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 AC105021.1-202ENST00000570572 669 ntBASIC14.09□□□□□ -0.15
CTLA4P16410 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.09□□□□□ -0.15
CTLA4P16410 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.09□□□□□ -0.15
CTLA4P16410 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.09□□□□□ -0.15
CTLA4P16410 AC112693.3-201ENST00000624819 1983 ntBASIC14.09□□□□□ -0.15
CTLA4P16410 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.09□□□□□ -0.15
CTLA4P16410 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTLA4P16410 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTLA4P16410 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CTLA4P16410 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.08□□□□□ -0.15
CTLA4P16410 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTLA4P16410 C18orf15-201ENST00000623680 2534 ntBASIC14.08□□□□□ -0.15
CTLA4P16410 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CTLA4P16410 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTLA4P16410 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.08□□□□□ -0.16
CTLA4P16410 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 AZGP1P1-201ENST00000411909 902 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 UPF3AP3-201ENST00000420996 769 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 RBPMS2P1-201ENST00000437762 623 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 SPDYE14P-201ENST00000442619 822 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.08□□□□□ -0.16
CTLA4P16410 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.08□□□□□ -0.16
CTLA4P16410 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.08□□□□□ -0.16
CTLA4P16410 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 AC004835.2-201ENST00000603762 682 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 AC097359.3-201ENST00000603982 1210 ntBASIC14.08□□□□□ -0.16
CTLA4P16410 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.08□□□□□ -0.16
CTLA4P16410 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CTLA4P16410 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTLA4P16410 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTLA4P16410 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTLA4P16410 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.07□□□□□ -0.16
CTLA4P16410 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CTLA4P16410 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.07□□□□□ -0.16
CTLA4P16410 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.07□□□□□ -0.16
CTLA4P16410 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 AC026150.2-201ENST00000564693 1156 ntBASIC14.07□□□□□ -0.16
CTLA4P16410 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.07□□□□□ -0.16
CTLA4P16410 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.07□□□□□ -0.16
CTLA4P16410 AC003101.2-201ENST00000612557 442 ntBASIC14.07□□□□□ -0.16
CTLA4P16410 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CTLA4P16410 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.07□□□□□ -0.16
CTLA4P16410 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTLA4P16410 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms