Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 MIR1202-201ENST00000408529 83 ntBASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AL590640.2-201ENST00000457038 527 ntBASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AL008638.5-201ENST00000623814 1298 ntBASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSB-PGBD3P0DP91 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 AC092171.3-201ENST00000610122 2651 ntBASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 AC005695.3-201ENST00000614522 232 ntBASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSB-PGBD3P0DP91 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CSB-PGBD3P0DP91 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 KRT8P35-201ENST00000483942 1338 ntBASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 AL591846.1-201ENST00000451736 433 ntBASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 AC244452.3-201ENST00000636814 210 ntBASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSB-PGBD3P0DP91 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CSB-PGBD3P0DP91 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms