Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST1O76090 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 MYCLP2-201ENST00000449268 967 ntBASIC16.56■□□□□ 0.24
BEST1O76090 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ELK1P1-201ENST00000485699 580 ntBASIC16.56■□□□□ 0.24
BEST1O76090 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST1O76090 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.56■□□□□ 0.24
BEST1O76090 AL596325.1-201ENST00000563991 1082 ntBASIC16.56■□□□□ 0.24
BEST1O76090 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.56■□□□□ 0.24
BEST1O76090 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.56■□□□□ 0.24
BEST1O76090 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.56■□□□□ 0.24
BEST1O76090 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BEST1O76090 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST1O76090 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BEST1O76090 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST1O76090 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST1O76090 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST1O76090 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
BEST1O76090 RRP7BP-205ENST00000566851 833 ntBASIC16.55■□□□□ 0.24
BEST1O76090 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST1O76090 AC093726.1-201ENST00000608064 963 ntBASIC16.55■□□□□ 0.24
BEST1O76090 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST1O76090 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST1O76090 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST1O76090 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
BEST1O76090 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST1O76090 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST1O76090 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 AC127383.1-201ENST00000444697 1800 ntBASIC16.54■□□□□ 0.24
BEST1O76090 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 AC022188.1-201ENST00000620960 1664 ntBASIC16.54■□□□□ 0.24
BEST1O76090 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.54■□□□□ 0.24
BEST1O76090 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 RN7SL692P-201ENST00000464677 288 ntBASIC16.54■□□□□ 0.24
BEST1O76090 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.54■□□□□ 0.24
BEST1O76090 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
BEST1O76090 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms