Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRCH4O75427 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.48■□□□□ 0.23
LRCH4O75427 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.48■□□□□ 0.23
LRCH4O75427 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRCH4O75427 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 TUBB3P1-201ENST00000405796 1332 ntBASIC16.47■□□□□ 0.23
LRCH4O75427 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH4O75427 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 AC074338.1-201ENST00000416825 156 ntBASIC16.47■□□□□ 0.23
LRCH4O75427 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 HLA-V-204ENST00000476601 1289 ntBASIC16.47■□□□□ 0.23
LRCH4O75427 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.47■□□□□ 0.23
LRCH4O75427 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH4O75427 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.47■□□□□ 0.23
LRCH4O75427 AC015911.4-201ENST00000588022 1070 ntBASIC16.47■□□□□ 0.23
LRCH4O75427 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 FO538757.1-201ENST00000623083 1397 ntBASIC16.47■□□□□ 0.23
LRCH4O75427 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.47■□□□□ 0.23
LRCH4O75427 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRCH4O75427 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRCH4O75427 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRCH4O75427 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH4O75427 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH4O75427 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRCH4O75427 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH4O75427 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.46■□□□□ 0.23
LRCH4O75427 AC025678.2-201ENST00000562061 970 ntBASIC16.46■□□□□ 0.23
LRCH4O75427 AC051619.7-201ENST00000568314 623 ntBASIC16.46■□□□□ 0.23
LRCH4O75427 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 AL138828.2-201ENST00000615812 383 ntBASIC16.46■□□□□ 0.23
LRCH4O75427 AL033527.5-202ENST00000641632 1098 ntBASIC16.46■□□□□ 0.23
LRCH4O75427 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.46■□□□□ 0.23
LRCH4O75427 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH4O75427 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms