Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GADD45BO75293 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GADD45BO75293 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.17■□□□□ 0.5
GADD45BO75293 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GADD45BO75293 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GADD45BO75293 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GADD45BO75293 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.16■□□□□ 0.5
GADD45BO75293 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 CICP4-201ENST00000447359 2812 ntBASIC18.16■□□□□ 0.5
GADD45BO75293 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GADD45BO75293 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 KRT19P2-202ENST00000557173 1012 ntBASIC18.16■□□□□ 0.5
GADD45BO75293 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.16■□□□□ 0.5
GADD45BO75293 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 AC073389.1-201ENST00000595595 795 ntBASIC18.16■□□□□ 0.5
GADD45BO75293 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 AC104692.2-201ENST00000603054 253 ntBASIC18.16■□□□□ 0.5
GADD45BO75293 AL773604.1-201ENST00000617417 272 ntBASIC18.16■□□□□ 0.5
GADD45BO75293 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.16■□□□□ 0.5
GADD45BO75293 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GADD45BO75293 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.16■□□□□ 0.5
GADD45BO75293 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.16■□□□□ 0.5
GADD45BO75293 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GADD45BO75293 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GADD45BO75293 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.15■□□□□ 0.5
GADD45BO75293 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 MRPL3P1-201ENST00000400109 1033 ntBASIC18.15■□□□□ 0.5
GADD45BO75293 AC098859.1-201ENST00000502915 1238 ntBASIC18.15■□□□□ 0.5
GADD45BO75293 KRT18P56-201ENST00000507275 550 ntBASIC18.15■□□□□ 0.5
GADD45BO75293 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.15■□□□□ 0.5
GADD45BO75293 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.15■□□□□ 0.5
GADD45BO75293 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
GADD45BO75293 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.15■□□□□ 0.5
GADD45BO75293 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.15■□□□□ 0.5
GADD45BO75293 SPTSSB-204ENST00000617024 1292 ntBASIC18.15■□□□□ 0.5
GADD45BO75293 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.15■□□□□ 0.5
GADD45BO75293 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GADD45BO75293 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.15■□□□□ 0.5
GADD45BO75293 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GADD45BO75293 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.14■□□□□ 0.5
GADD45BO75293 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
GADD45BO75293 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GADD45BO75293 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.14■□□□□ 0.5
GADD45BO75293 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
GADD45BO75293 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GADD45BO75293 ZBED1P1-201ENST00000502364 1930 ntBASIC18.14■□□□□ 0.49
GADD45BO75293 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
GADD45BO75293 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GADD45BO75293 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.14■□□□□ 0.49
GADD45BO75293 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.14■□□□□ 0.49
GADD45BO75293 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.14■□□□□ 0.49
GADD45BO75293 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms