Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.18■□□□□ 0.02
GFRA3O60609 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 AC138894.2-201ENST00000602838 371 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 AC011247.3-201ENST00000603297 438 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 MIR6816-201ENST00000620368 66 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 AL138799.1-201ENST00000448213 1675 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 AC116353.5-201ENST00000638148 1699 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GFRA3O60609 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.17■□□□□ 0.02
GFRA3O60609 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.17■□□□□ 0.02
GFRA3O60609 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.17■□□□□ 0.02
GFRA3O60609 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GFRA3O60609 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 AC244250.3-201ENST00000620749 366 ntBASIC15.17■□□□□ 0.02
GFRA3O60609 AC005332.8-201ENST00000622750 2735 ntBASIC15.17■□□□□ 0.02
GFRA3O60609 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 AC005622.1-201ENST00000636801 1703 ntBASIC15.17■□□□□ 0.02
GFRA3O60609 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GFRA3O60609 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.17■□□□□ 0.02
GFRA3O60609 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.17■□□□□ 0.02
GFRA3O60609 MRPL37P1-201ENST00000592451 1337 ntBASIC15.17■□□□□ 0.02
GFRA3O60609 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.16■□□□□ 0.02
GFRA3O60609 POM121L8P-201ENST00000417732 1281 ntBASIC15.16■□□□□ 0.02
GFRA3O60609 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.16■□□□□ 0.02
GFRA3O60609 POM121L9P-203ENST00000441984 1285 ntBASIC15.16■□□□□ 0.02
GFRA3O60609 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 OR10B1P-201ENST00000601666 907 ntBASIC15.16■□□□□ 0.02
GFRA3O60609 AC068587.8-201ENST00000641239 219 ntBASIC15.16■□□□□ 0.02
GFRA3O60609 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 AL031731.1-201ENST00000642131 2094 ntBASIC15.16■□□□□ 0.02
GFRA3O60609 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.16■□□□□ 0.02
GFRA3O60609 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GFRA3O60609 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
GFRA3O60609 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms